Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-541 in MPM Mesothelioma Gordon Cluster 32 Table contains all genes in the MPM Mesothelioma Gordon cluster number 32. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-541 63982 ANO3 anoctamin 3 [Source:HGNC Symbol;Acc:14004] zzz999 79794 C12orf49 chromosome 12 open reading frame 49 [Source:HGNC Symbol;Acc:26128] zzz999 1813 DRD2 dopamine receptor D2 [Source:HGNC Symbol;Acc:3023] T 54487 DGCR8 DiGeorge syndrome critical region gene 8 [Source:HGNC Symbol;Acc:2847] T 23046 KIF21B kinesin family member 21B [Source:HGNC Symbol;Acc:29442] zzz999 2835 GPR12 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:4466] zzz999 1641 DCX doublecortin [Source:HGNC Symbol;Acc:2714] P T 27013 CNPPD1 cyclin Pas1/PHO80 domain containing 1 [Source:HGNC Symbol;Acc:25220] zzz999 2295 FOXF2 forkhead box F2 [Source:HGNC Symbol;Acc:3810] zzz999 4635 MYL4 myosin, light chain 4, alkali; atrial, embryonic [Source:HGNC Symbol;Acc:7585] zzz999 5715 PSMD9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 [Source:HGNC Symbol;Acc:9567] T 55090 MED9 mediator complex subunit 9 [Source:HGNC Symbol;Acc:25487] zzz999 83887 TTLL2 tubulin tyrosine ligase-like family, member 2 [Source:HGNC Symbol;Acc:21211] T 26253 CLEC4E C-type lectin domain family 4, member E [Source:HGNC Symbol;Acc:14555] zzz999 23390 ZDHHC17 zinc finger, DHHC-type containing 17 [Source:HGNC Symbol;Acc:18412] zzz999 54959 ODAM odontogenic, ameloblast asssociated [Source:HGNC Symbol;Acc:26043] zzz999 5028 P2RY1 purinergic receptor P2Y, G-protein coupled, 1 [Source:HGNC Symbol;Acc:8539] zzz999 56243 KIAA1217 KIAA1217 [Source:HGNC Symbol;Acc:25428] zzz999 54069 MIS18A MIS18 kinetochore protein homolog A (S. pombe) [Source:HGNC Symbol;Acc:1286] zzz999 54363 HAO1 hydroxyacid oxidase (glycolate oxidase) 1 [Source:HGNC Symbol;Acc:4809] zzz999 55540 IL17RB interleukin 17 receptor B [Source:HGNC Symbol;Acc:18015] zzz999 10978 CLP1 CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16999] zzz999 3081 HGD homogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:4892] zzz999 3439 IFNA1 interferon, alpha 1 [Source:HGNC Symbol;Acc:5417] zzz999 2820 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:HGNC Symbol;Acc:4456] T 23161 SNX13 sorting nexin 13 [Source:HGNC Symbol;Acc:21335] zzz999 131 ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide [Source:HGNC Symbol;Acc:256] zzz999 5786 PTPRA protein tyrosine phosphatase, receptor type, A [Source:HGNC Symbol;Acc:9664] T 9849 zzz999 zzz999 zzz999 3358 HTR2C 5-hydroxytryptamine (serotonin) receptor 2C [Source:HGNC Symbol;Acc:5295] zzz999 23091 ZC3H13 zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:20368] zzz999 55343 SLC35C1 solute carrier family 35, member C1 [Source:HGNC Symbol;Acc:20197] zzz999 404281 YY2 YY2 transcription factor [Source:HGNC Symbol;Acc:31684] zzz999 2827 GPR3 G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:4484] zzz999 64849 SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:HGNC Symbol;Acc:14430] zzz999 1669 DEFA4 defensin, alpha 4, corticostatin [Source:HGNC Symbol;Acc:2763] zzz999 3849 KRT2 keratin 2 [Source:HGNC Symbol;Acc:6439] T 146754 DNAH2 dynein, axonemal, heavy chain 2 [Source:HGNC Symbol;Acc:2948] zzz999 3452 IFNA21 interferon, alpha 21 [Source:HGNC Symbol;Acc:5424] zzz999 2324 FLT4 fms-related tyrosine kinase 4 [Source:HGNC Symbol;Acc:3767] zzz999 2515 ADAM2 ADAM metallopeptidase domain 2 [Source:HGNC Symbol;Acc:198] zzz999 1748 DLX4 distal-less homeobox 4 [Source:HGNC Symbol;Acc:2917] T 60558 GUF1 GUF1 GTPase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25799] zzz999 55676 SLC30A6 solute carrier family 30 (zinc transporter), member 6 [Source:HGNC Symbol;Acc:19305] zzz999 79974 C7orf58 chromosome 7 open reading frame 58 [Source:HGNC Symbol;Acc:26159] T 2583 B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 [Source:HGNC Symbol;Acc:4117] zzz999 10847 SRCAP Snf2-related CREBBP activator protein [Source:HGNC Symbol;Acc:16974] T 1807 DPYS dihydropyrimidinase [Source:HGNC Symbol;Acc:3013] zzz999 6718 AKR1D1 aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase) [Source:HGNC Symbol;Acc:388] zzz999 22798 LAMB4 laminin, beta 4 [Source:HGNC Symbol;Acc:6491] zzz999 10107 TRIM10 tripartite motif containing 10 [Source:HGNC Symbol;Acc:10072] zzz999 6493 SIM2 single-minded homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:10883] zzz999 9388 LIPG lipase, endothelial [Source:HGNC Symbol;Acc:6623] T 79180 EFHD2 EF-hand domain family, member D2 [Source:HGNC Symbol;Acc:28670] zzz999 3670 ISL1 ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:6132] zzz999 8001 GLRA3 glycine receptor, alpha 3 [Source:HGNC Symbol;Acc:4328] zzz999 9904 RBM19 RNA binding motif protein 19 [Source:HGNC Symbol;Acc:29098] zzz999 23637 RABGAP1 RAB GTPase activating protein 1 [Source:HGNC Symbol;Acc:17155] T 4293 MAP3K9 mitogen-activated protein kinase kinase kinase 9 [Source:HGNC Symbol;Acc:6861] zzz999 11082 ESM1 endothelial cell-specific molecule 1 [Source:HGNC Symbol;Acc:3466] zzz999 23132 RAD54L2 RAD54-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:29123] T 27286 SRPX2 sushi-repeat containing protein, X-linked 2 [Source:HGNC Symbol;Acc:30668] zzz999 10439 OLFM1 olfactomedin 1 [Source:HGNC Symbol;Acc:17187] zzz999 79036 C19orf50 chromosome 19 open reading frame 50 [Source:HGNC Symbol;Acc:28420] T 1801 DPH1 DPH1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:3003] zzz999 3227 HOXC11 homeobox C11 [Source:HGNC Symbol;Acc:5123] zzz999 50835 TAS2R9 taste receptor, type 2, member 9 [Source:HGNC Symbol;Acc:14917] zzz999 7752 ZNF200 zinc finger protein 200 [Source:HGNC Symbol;Acc:12993] T 55070 DET1 de-etiolated homolog 1 (Arabidopsis) [Source:HGNC Symbol;Acc:25477] zzz999 29780 PARVB parvin, beta [Source:HGNC Symbol;Acc:14653] zzz999 5648 MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) [Source:HGNC Symbol;Acc:6901] zzz999 64600 PLA2G2F phospholipase A2, group IIF [Source:HGNC Symbol;Acc:30040] zzz999 2001 ELF5 E74-like factor 5 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3320] zzz999 2939 GSTA2 glutathione S-transferase alpha 2 [Source:HGNC Symbol;Acc:4627] zzz999 79977 GRHL2 grainyhead-like 2 (Drosophila) [Source:HGNC Symbol;Acc:2799] T 1259 CNGA1 cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148] zzz999 5106 PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:HGNC Symbol;Acc:8725] zzz999 9641 IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:HGNC Symbol;Acc:14552] zzz999 6583 SLC22A4 solute carrier family 22 (organic cation/ergothioneine transporter), member 4 [Source:HGNC Symbol;Acc:10968] zzz999 51104 FAM108B1 family with sequence similarity 108, member B1 [Source:HGNC Symbol;Acc:24278] zzz999 4682 NUBP1 nucleotide binding protein 1 (MinD homolog, E. coli) [Source:HGNC Symbol;Acc:8041] zzz999 8193 DPF1 D4, zinc and double PHD fingers family 1 [Source:HGNC Symbol;Acc:20225] zzz999 2793 GNGT2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 [Source:HGNC Symbol;Acc:4412] zzz999 25814 ATXN10 ataxin 10 [Source:HGNC Symbol;Acc:10549] zzz999 6710 SPTB spectrin, beta, erythrocytic [Source:HGNC Symbol;Acc:11274] T 79840 NHEJ1 nonhomologous end-joining factor 1 [Source:HGNC Symbol;Acc:25737] T 5458 POU4F2 POU class 4 homeobox 2 [Source:HGNC Symbol;Acc:9219] zzz999 56269 IRGC immunity-related GTPase family, cinema [Source:HGNC Symbol;Acc:28835] zzz999 1463 NCAN neurocan [Source:HGNC Symbol;Acc:2465] zzz999 57453 DSCAML1 Down syndrome cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:14656] zzz999 95681 TSGA14 testis specific, 14 [Source:HGNC Symbol;Acc:12370] T 2038 EPB42 erythrocyte membrane protein band 4.2 [Source:HGNC Symbol;Acc:3381] zzz999 55738 ARFGAP1 ADP-ribosylation factor GTPase activating protein 1 [Source:HGNC Symbol;Acc:15852] T 2982 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 [Source:HGNC Symbol;Acc:4685] zzz999 6588 SLN sarcolipin [Source:HGNC Symbol;Acc:11089] zzz999 9132 KCNQ4 potassium voltage-gated channel, KQT-like subfamily, member 4 [Source:HGNC Symbol;Acc:6298] zzz999 57060 PCBP4 poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:8652] zzz999 26168 SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 [Source:HGNC Symbol;Acc:17862] zzz999 2913 GRM3 glutamate receptor, metabotropic 3 [Source:HGNC Symbol;Acc:4595] zzz999 80258 EFHC2 EF-hand domain (C-terminal) containing 2 [Source:HGNC Symbol;Acc:26233] zzz999 442862 PRYP4 PTPN13-like, Y-linked pseudogene 4 [Source:HGNC Symbol;Acc:34021] zzz999 407 ARR3 arrestin 3, retinal (X-arrestin) [Source:HGNC Symbol;Acc:710] zzz999 10489 LRRC41 leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:16917] zzz999 84516 DCTN5 dynactin 5 (p25) [Source:HGNC Symbol;Acc:24594] zzz999 50837 TAS2R7 taste receptor, type 2, member 7 [Source:HGNC Symbol;Acc:14913] zzz999 5827 PXMP2 peroxisomal membrane protein 2, 22kDa [Source:HGNC Symbol;Acc:9716] zzz999 55777 MBD5 methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:20444] zzz999 1674 DES desmin [Source:HGNC Symbol;Acc:2770] T 64837 KLC2 kinesin light chain 2 [Source:HGNC Symbol;Acc:20716] T 9501 RPH3AL rabphilin 3A-like (without C2 domains) [Source:HGNC Symbol;Acc:10296] zzz999 79175 ZNF343 zinc finger protein 343 [Source:HGNC Symbol;Acc:16017] zzz999 55223 TRIM62 tripartite motif containing 62 [Source:HGNC Symbol;Acc:25574] T 10557 RPP38 ribonuclease P/MRP 38kDa subunit [Source:HGNC Symbol;Acc:30329] zzz999 5144 PDE4D phosphodiesterase 4D, cAMP-specific [Source:HGNC Symbol;Acc:8783] zzz999 1491 CTH cystathionase (cystathionine gamma-lyase) [Source:HGNC Symbol;Acc:2501] zzz999 80031 SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:HGNC Symbol;Acc:16770] P 5833 PCYT2 phosphate cytidylyltransferase 2, ethanolamine [Source:HGNC Symbol;Acc:8756] zzz999 11075 STMN2 stathmin-like 2 [Source:HGNC Symbol;Acc:10577] zzz999 9911 TMCC2 transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:24239] T 23321 TRIM2 tripartite motif containing 2 [Source:HGNC Symbol;Acc:15974] zzz999 7320 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:HGNC Symbol;Acc:12473] zzz999 3274 HRH2 histamine receptor H2 [Source:HGNC Symbol;Acc:5183] zzz999 8390 OR1G1 olfactory receptor, family 1, subfamily G, member 1 [Source:HGNC Symbol;Acc:8204] zzz999 54429 TAS2R5 taste receptor, type 2, member 5 [Source:HGNC Symbol;Acc:14912] zzz999 23746 AIPL1 aryl hydrocarbon receptor interacting protein-like 1 [Source:HGNC Symbol;Acc:359] zzz999 6759 SSX4B synovial sarcoma, X breakpoint 4B [Source:HGNC Symbol;Acc:16880] zzz999 1875 E2F5 E2F transcription factor 5, p130-binding [Source:HGNC Symbol;Acc:3119] zzz999 8336 HIST1H2AM histone cluster 1, H2am [Source:HGNC Symbol;Acc:4735] zzz999 2170 FABP3 fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) [Source:HGNC Symbol;Acc:3557] zzz999 1856 DVL2 dishevelled, dsh homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:3086] zzz999 3812 KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 [Source:HGNC Symbol;Acc:6339] T 6555 SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter family), member 2 [Source:HGNC Symbol;Acc:10906] T 22853 LMTK2 lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:17880] zzz999 10123 ARL4C ADP-ribosylation factor-like 4C [Source:HGNC Symbol;Acc:698] T 4887 NPY2R neuropeptide Y receptor Y2 [Source:HGNC Symbol;Acc:7957] zzz999 9310 ZNF235 zinc finger protein 235 [Source:HGNC Symbol;Acc:12866] zzz999

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